Gene: AT1G30230

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G30230
  • Transcript Identifier AT1G30230.1
  • Gene Type Coding gene
  • Location Chr1 : 10639286-10640515 : positive

Gene Family Information

  • ID HOM05D001045
  • #Genes/#Species 581/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G30230.1
  • symbol eEF-1Bb1
  • Alias EF1Bb,elongation factor 1B beta
  • full_name eukaryotic elongation factor 1B beta 1
  • uniprot P48006

Descriptions

  • Description translation elongation factor EF1B/ribosomal protein S6 family protein
  • Computational description Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation, response to cadmium ion; LOCATED IN: plasma membrane, eukaryotic translation elongation factor 1 complex; EXPRESSED IN: guard cell, cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Translation elongation factor EF1B/ribosomal protein S6 (InterPro:IPR014717), Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange (InterPro:IPR014038), Translation elongation factor EF1B, beta/delta chains, conserved site (InterPro:IPR001326); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1B/ribosomal protein S6 family protein (TAIR:AT2G18110.1); Has 1011 Blast hits to 1009 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 524; Fungi - 164; Plants - 164; Viruses - 0; Other Eukaryotes - 159 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006414
IEA
GOA Databasetranslational elongation
GO:0006414
IBA
Gene Ontologytranslational elongation1
GO:0006414
IEA
InterProtranslational elongation
GO:0006412
IEA
GOA Databasetranslation
GO:0050790
IEA
GOA Databaseregulation of catalytic activity
GO:2001006
IMP
Gene Ontologyregulation of cellulose biosynthetic process2
GO:0071668
IMP
Gene Ontologyplant-type cell wall assembly2
GO:0009808
IMP
Gene Ontologylignin metabolic process2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005085
IBA
Gene Ontologyguanyl-nucleotide exchange factor activity1
GO:0003746
IEA
GOA Databasetranslation elongation factor activity
GO:0003746
IEA
InterProtranslation elongation factor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IDA, HDA
IBA
Gene Ontologycytosol1 2 3
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005634
HDA
Gene Ontologynucleus4
GO:0005886
IDA
Gene Ontologyplasma membrane2
GO:0005853
IEA
Gene Ontologyeukaryotic translation elongation factor 1 complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014038 Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain
IPR014717 Translation elongation factor EF1B/ribosomal protein S6
IPR036219 Translation elongation factor eEF-1beta-like superfamily
IPR036282 Glutathione S-transferase, C-terminal domain superfamily
Mapman id Description
17.5.1.2.1 Protein biosynthesis.translation elongation.eEF1 aminoacyl-tRNA binding factor activity.eEF1B eEF1A-GDP-recycling complex.component eEF1B-beta/-delta