Gene: AT5G16790
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G16790
- Transcript Identifier AT5G16790.1
- Gene Type Coding gene
- Location Chr5 : 5522642-5523475 : negative
Gene Family Information
- ID HOM05D005180
- #Genes/#Species 145/99
- Phylogenetic origin
- ID ORTHO05D006136
- #Genes/#Species 147/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G16790.1
- symbol THO7
- uniprot Q8LDS5
Descriptions
- Description Tho complex subunit 7/Mft1p
- Computational description THO7; CONTAINS InterPro DOMAIN/s: Tho complex subunit 7 (InterPro:IPR018018), Tho complex subunit 7/Mft1p (InterPro:IPR008501); BEST Arabidopsis thaliana protein match is: Tho complex subunit 7/Mft1p (TAIR:AT3G02950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006406 | IBA | Gene Ontology | mRNA export from nucleus | 1 |
| GO:0006397 | IEA | GOA Database | mRNA processing | |
| GO:0006397 | IEA | InterPro | mRNA processing | |
| GO:0008380 | IEA | GOA Database | RNA splicing | |
| GO:0051028 | IEA | GOA Database | mRNA transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | GOA Database | RNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0000347 | IDA | Gene Ontology | THO complex | 2 |
| GO:0000445 | IEA | GOA Database | THO complex part of transcription export complex | |
| GO:0000445 | IBA | Gene Ontology | THO complex part of transcription export complex | 1 |
| GO:0000445 | IEA | InterPro | THO complex part of transcription export complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR008501 | THO complex subunit 7/Mft1 |
| Mapman id | Description |
|---|---|
| 16.10.1.1.6 | RNA processing.messenger ribonucleoparticle (mRNP) export.TREX/THO mRNP trafficking complex.THO subcomplex.component THOC7 |