Gene: Sopen11g028100

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g028100
  • Transcript Identifier Sopen11g028100.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 63773999-63780247 : positive

Gene Family Information

  • ID HOM05D004298
  • #Genes/#Species 166/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g028100.1

Descriptions

  • Description Encodes a chloroplast-localized hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) synthase (HDS), catalyzes the formation of HMBPP from 2-C-methyl-D-erythrytol 2,4-cyclodiphosphate (MEcPP). The HDS enzyme controls the penultimate steps of the biosynthesis of IPP and dimethylallyl diphosphate (DMAPP) via the MEP pathway and may serve as a metabolic control point for SA-mediated disease resistance. In the light, the electrons required for the reaction catalyzed by HDS are directly provided by the electron flow from photosynthesis via ferredoxin. In the dark however, the enzyme requires an electron shuttle: ferredoxin-NADP
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016114
IEA
InterProterpenoid biosynthetic process
GO:0044237
IEA
InterProcellular metabolic process
GO:0008299
IEA
InterProisoprenoid biosynthetic process
GO:0009617
ISO
PLAZA Integrative Orthologyresponse to bacterium AT5G60600
GO:0019288
ISO
PLAZA Integrative Orthologyisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway AT5G60600
GO:0009862
ISO
PLAZA Integrative Orthologysystemic acquired resistance, salicylic acid mediated signaling pathway AT5G60600

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046429
IEA
InterPro4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity
GO:0005506
IEA
InterProiron ion binding
GO:0051539
ISO
PLAZA Integrative Orthology4 iron, 4 sulfur cluster binding AT5G60600

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G60600
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G60600
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT5G60600

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type
IPR011005 Dihydropteroate synthase-like
IPR017178 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical
Mapman id Description
9.1.2.7 Secondary metabolism.terpenoids.methylerythritol phosphate (MEP) pathway.4-hydroxy-3-methylbut-2-enyl diphosphate synthase