Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G12580 LG-1 + View
Acer truncatum Atru.BG.119.p chr3 - View
Actinidia chinensis Actinidia03730 Lachesis_group9 - View
Actinidia chinensis Actinidia20454 Lachesis_group15 + View
Arabidopsis lyrata AL8G37190 scaffold_8 + View
Avicennia marina MSTRG.17806 ScioBoG_19834_HRSCAF_19925 - View
Avicennia marina MSTRG.12319 ScioBoG_17730_HRSCAF_17811 - View
Amaranthus hybridus Ah.01g014360 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic (EC 1.17.7.1) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase) (Protein CHLOROPLAST BIOGENESIS 4) (Protein CONSTITUTIVE SUBTILISIN 3) AmaHy_arrow1_Scaffold_1 - View
Aquilegia oxysepala Aqoxy1G01246 CHR01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.068WZH PTHR30454//PTHR30454:SF0 - 4-HYDROXY-3-METHYLBUT-2-EN-1-YL DIPHOSPHATE SYNTHASE // 4-HYDROXY-3-METHYLBUT-2-EN-1-YL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.X2DMBM K03526 - (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (gcpE, ispG) arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.VBZF8N K03526 - (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (gcpE, ispG) arahy.Tifrunner.gnm1.Arahy.08 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ETHX4E PTHR30454//PTHR30454:SF0 - 4-HYDROXY-3-METHYLBUT-2-EN-1-YL DIPHOSPHATE SYNTHASE // 4-HYDROXY-3-METHYLBUT-2-EN-1-YL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC arahy.Tifrunner.gnm1.Arahy.18 + View
Arabidopsis thaliana AT5G60600 4-hydroxy-3-methylbut-2-enyl diphosphate synthase Encodes a chloroplast-localized hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) synthase (HDS)%2C catalyzes the formation of HMBPP from 2-C-methyl-D-erythrytol 2%2C4-cyclodiphosphate (MEcPP). The HDS enzyme controls the penultimate steps of the biosynthesis of IPP and dimethylallyl diphosphate (DMAPP) via the MEP pathway and may serve as a metabolic control point for SA-mediated disease resistance. In the light%2C the electrons required for the reaction catalyzed by HDS are directly provided by the electron flow from photosynthesis via ferredoxin. In the dark however%2C the enzyme requires an electron shuttle: ferredoxin-NADP%3Csup%3E+%3C/sup%3E reductase. 4-hydroxy-3-methylbut-2-enyl diphosphate synthase (HDS)%3B FUNCTIONS IN: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity%2C 4 iron%2C 4 sulfur cluster binding%3B INVOLVED IN: response to light stimulus%2C isoprenoid biosynthetic process%2C isopentenyl diphosphate biosynthetic process%2C mevalonate-independent pathway%2C response to bacterium%2C systemic acquired resistance%2C salicylic acid mediated signaling pathway%3B LOCATED IN: chloroplast stroma%2C chloroplast%2C chloroplast envelope%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Dihydropteroate synthase-like (InterPro:IPR011005)%2C 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase%2C atypical (InterPro:IPR017178)%2C 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase%2C bacterial-type (InterPro:IPR004588)%3B Has 12699 Blast hits to 7350 proteins in 2074 species: Archae - 0%3B Bacteria - 8133%3B Metazoa - 2%3B Fungi - 2%3B Plants - 72%3B Viruses - 0%3B Other Eukaryotes - 4490 (source: NCBI BLink). Chr5 + View
Amborella trichopoda ATR0115G030 AmTr_v1.0_scaffold00175 + View
Brassica carinata BcaB08g36355 ChrB08 + View
Brassica carinata BcaC04g19719 ChrC04 + View
Brassica napus A10p17790 A10 + View
Brassica napus C09p53300 C09 + View
Brassica oleracea BolC9t58204H C9 + View
Brassica rapa BraA10t43856Z A10 + View
Beta vulgaris EL10Ac9g22507 1.17.7.1 - (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) / 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Chr9_EL10_PGA_scaffold8 + View
Camellia sinensis var. sinensis CSS0023657 hydroxymethylbutenyl diphosphate synthase [Camellia sinensis] Chr13 + View
Camellia sinensis var. sinensis CSS0023686 hydroxymethylbutenyl diphosphate synthase [Camellia sinensis] Chr11 - View
Capsicum annuum CAN.G631.24 PGAv.1.6.scaffold631 + View
Cannabis sativa CANSAT54G2863 NC_044375.1 + View
Cicer arietinum L. Ca_01417_v3 Ca_LG1_v3 - View
Corylus avellana Haze_23837 Similar to ISPG: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic (Arabidopsis thaliana OX%3D3702) 6 - View
Coffea canephora Cc01_g11160 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, chloroplastic chr1 - View
Citrus clementina Ciclev10027881m.g scaffold_8 - View
Cardamine hirsuta CARHR274260 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Chr8 + View
Carya illinoinensis CiPaw.14G080300 1.17.7.1 - (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) / 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Chr14 + View
Carya illinoinensis CiPaw.13G112600 1.17.7.1 - (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) / 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Chr13 + View
Citrullus lanatus ClCG03G002170 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase CG_Chr03 - View
Cucumis melo MELO3C005061.2 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase chr12 - View
Carica papaya Cpa.g.sc216.13 supercontig_216 - View
Chenopodium quinoa AUR62024990 ISPG: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase C_Quinoa_Scaffold_4082 - View
Chenopodium quinoa AUR62039630 ISPG: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase C_Quinoa_Scaffold_3093 + View
Capsella rubella Carub.0008s2128 1.17.7.1 - (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) / 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase scaffold_8 + View
Cucumis sativus L. CsaV3_1G012820 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase chr1 - View
Daucus carota DCAR_015537 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase DCARv2_Chr4 + View
Daucus carota DCAR_006060 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase DCARv2_Chr2 + View
Davidia involucrata Dinv32749 GWHABJS00000010 - View
Durio zibethinus Duzib168G1617 NW_019168159.1 - View
Erigeron canadensis ECA238G4788 Conyza_canadensis_scaffold:6 - View
Eucalyptus grandis Eucgr.B02495 Chr02 + View
Erythranthe guttata Migut.N02606 scaffold_14 - View
Eutrema salsugineum Thhalv10012774m.g 1.17.7.1 - (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) / 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase scaffold_2 - View
Fragaria x ananassa FAN25G3839 1.17.7.1 - (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) / 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Fvb3-1 + View
Fragaria x ananassa FAN16G0818 PTHR30454:SF0 - 4-HYDROXY-3-METHYLBUT-2-EN-1-YL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC Fvb3-3 - View
Fragaria x ananassa FAN11G2723 1.17.7.1 - (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) / 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Fvb3-4 + View
Fragaria x ananassa FAN21G2260 1.17.7.1 - (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) / 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Fvb3-2 - View
Fragaria vesca FvH4_3g32460 1.17.7.1 - (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) / 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Fvb3 - View
Glycine max Glyma.13G326400 1.17.7.1 - (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) / 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Gm13 - View
Helianthus annuus HanXRQChr14g0452871 Probable 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic HanXRQChr14 - View
Hydrangea macrophylla Hma1.2p1_1031F.1_g250040 Hma1.2p1_1031F.1 + View
Lupinus albus Lalb_Chr14g0374701 1.17.7.1 - (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) / 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Lalb_Chr14 - View
Lupinus albus Lalb_Chr03g0027311 1.17.7.1 - (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) / 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Lalb_Chr03 + View
Lupinus albus Lalb_Chr24g0394611 1.17.7.1 - (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) / 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Lalb_Chr24 + View
Lotus japonicus Lj3g0003128 1.17.7.1 - (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) / 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase chr3 - View
Lonicera japonica Lj2C1029G11 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_2_98360 1.17.7.1 - (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) / 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Lsat_1_v8_lg_2 - View
Magnolia biondii MBI07_g19314_MAGBIO AED:0.11 Chr07 - View
Malus domestica MD03G1117300 4-hydroxy-3-methylbut-2-enyl diphosphate synthase Chr03 + View
Malus domestica MD11G1135000 4-hydroxy-3-methylbut-2-enyl diphosphate synthase Chr11 + View
Manihot esculenta Manes.04G021700 Chromosome04 - View
Manihot esculenta Manes.11G144700 Chromosome11 + View
Medicago truncatula Medtr2g094160 4-hydroxy-3-methylbut-2-enyl diphosphate synthase chr2 + View
Nelumbo nucifera Nn2g10781 chr2 + View
Nicotiana tabacum Nitab4.5_0000650g0220 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type, 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical, Aldolase-type TIM barrel Nitab4.5_0000650 + View
Olea europaea Oeu059093.1 chr20 + View
Olea europaea Oeu002865.1 chr11 + View
Petunia axillaris Peaxi162Scf00270g00819 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Peaxi162Scf00270 - View
Punica granatum PGR102G1912 NC_045129.1 + View
Prunus persica Prupe.6G101000 1.17.7.1 - (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) / 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Pp06 + View
Pisum sativum Psat5g278240 GcpE protein chr5LG3 + View
Papaver somniferum PSO384G0735 NC_039368.1 - View
Papaver somniferum PSO339G0771 NC_039366.1 - View
Populus trichocarpa Potri.004G210400 1.17.7.1 - (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) / 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Chr04 - View
Populus trichocarpa Potri.009G013400 1.17.7.1 - (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) / 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Chr09 + View
Phaseolus vulgaris Phvul.005G135800 1.17.7.1 - (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) / 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Chr05 - View
Quercus lobata QL01p022296 1 - View
Rosa chinensis RcHm_v2.0_Chr5g0059471 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim01G0217200 chr01 - View
Striga asiatica SGA_v2.0_scaffold2G00894 scaffold2 - View
Salvia bowleyana SalBow3G4399 GWHASIU00000006 + View
Salix brachista Sabra09G0008100 GWHAAZH00000009 - View
Salix brachista Sabra04G0142000 GWHAAZH00000004 - View
Simmondsia chinensis Sc06g0010150 GWHAASQ00000006 + View
Sechium edule Sed0018088 LG01 + View
Solanum lycopersicum Solyc11g069380.2 GcpE SL4.0ch11 + View
Schrenkiella parvula Sp6g22170 1.17.7.1 - (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) / 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase ch6-6 + View
Solanum tuberosum PGSC0003DMG400008050 GcpE ST4.03ch11 - View
Trochodendron aralioides TAR633G1103 group2 - View
Trochodendron aralioides TAR636G1671 group1 - View
Theobroma cacao Thecc.09G340000 4-hydroxy-3-methylbut-2-enyl diphosphate synthase Chromosome_9 + View
Tarenaya hassleriana THA.LOC104810855 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin)%2C chloroplastic NW_010965304.1 + View
Trifolium pratense TPR.G11486 Tp57577_TGAC_v2_LG7 + View
Tripterygium wilfordii TWI31G1183 NC_052233.1 + View
Tripterygium wilfordii TWI79G1123 NC_052238.1 + View
Vaccinium macrocarpon vmacro14439 Similar to ISPG: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1080G1181 CM024079.1 + View
Vitis vinifera GSVIVG01025182001 chr6 - View