Gene: Sopen11g025600

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g025600
  • Transcript Identifier Sopen11g025600.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 61177573-61185534 : positive

Gene Family Information

  • ID HOM05D002268
  • #Genes/#Species 297/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g025600.1

Descriptions

  • Description embryo defective 2738 (emb2738) | FUNCTIONS IN: GTP binding | INVOLVED IN: embryo development ending in seed dormancy | LOCATED IN: chloroplast | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Small GTP-binding protein , GTP-binding, EngA , GTP1/OBG , GTP-binding protein, HSR1-related | BEST Arabidopsis thaliana protein match is: GTP binding, GTP binding
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT3G12080
GO:0042793
ISO
PLAZA Integrative Orthologyplastid transcription AT3G12080

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005525
IEA
InterProGTP binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G12080

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G12080

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016484 GTP-binding protein EngA
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR032859 GTPase Der, C-terminal KH-domain-like
IPR005225 Small GTP-binding protein domain
IPR015946 K homology domain-like, alpha/beta
IPR006073 GTP binding domain
Mapman id Description
35.1 not assigned.annotated