Gene: AT3G12080

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G12080
  • Transcript Identifier AT3G12080.1
  • Gene Type Coding gene
  • Location Chr3 : 3847851-3851980 : positive

Gene Family Information

  • ID HOM05D002268
  • #Genes/#Species 297/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G12080.1
  • symbol emb2738
  • Alias EngA-1
  • full_name embryo defective 2738
  • uniprot B5X565

Descriptions

  • Description GTP-binding family protein
  • Computational description embryo defective 2738 (emb2738); FUNCTIONS IN: GTP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding, EngA (InterPro:IPR016484), Small GTP-binding protein (InterPro:IPR005225), GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: GTP binding;GTP binding (TAIR:AT5G39960.1); Has 46668 Blast hits to 25884 proteins in 2974 species: Archae - 250; Bacteria - 36183; Metazoa - 387; Fungi - 453; Plants - 421; Viruses - 0; Other Eukaryotes - 8974 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009793
IMP
NAS
Gene Ontologyembryo development ending in seed dormancy1
GO:0042793
IMP
Gene Ontologyplastid transcription1
GO:0042254
IEA
GOA Databaseribosome biogenesis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005525
IEA
Gene OntologyGTP binding
GO:0005525
IEA
InterProGTP binding
GO:0003729
IDA
Gene OntologymRNA binding2
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IDA, HDA
ISM, IBA
Gene Ontologychloroplast1 3 4
GO:0005829
HDA
Gene Ontologycytosol5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015946 K homology domain-like, alpha/beta
IPR006073 GTP binding domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR032859 GTPase Der, C-terminal KH-domain-like
IPR016484 GTP-binding protein EngA
IPR005225 Small GTP-binding protein domain
Mapman id Description
35.1 not assigned.annotated