Gene: Sopen11g025590
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g025590
- Transcript Identifier Sopen11g025590.1
- Gene Type Coding gene
- Location Spenn-ch11 : 61150338-61153475 : negative
Gene Family Information
- ID HOM05D000008
- #Genes/#Species 9932/97
- Phylogenetic origin
- ID ORTHO05D000005
- #Genes/#Species 8869/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen11g025590.1
Descriptions
- Description Encodes a putative R2R3-type MYB transcription factor (MYB83). | myb domain protein 83 (MYB83) | CONTAINS InterPro DOMAIN/s: SANT, DNA-binding , Homeodomain-like , Myb, DNA-binding , HTH transcriptional regulator, Myb-type, DNA-binding , Homeodomain-related , Myb transcription factor | BEST Arabidopsis thaliana protein match is: myb domain protein 46
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT5G12870 |
| GO:0050832 | ISO | PLAZA Integrative Orthology | defense response to fungus | AT5G12870 |
| GO:0009834 | ISO | PLAZA Integrative Orthology | plant-type secondary cell wall biogenesis | AT5G12870 |
| GO:1901348 | ISO | PLAZA Integrative Orthology | positive regulation of secondary cell wall biogenesis | AT5G12870 |
| GO:2000652 | ISO | PLAZA Integrative Orthology | regulation of secondary cell wall biogenesis | AT5G12870 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | ISO | PLAZA Integrative Orthology | DNA-binding transcription factor activity | AT5G12870 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT5G12870 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G12870 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.2.1 | RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB) |