Gene: Sopen11g004900

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g004900
  • Transcript Identifier Sopen11g004900.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 3356242-3358143 : positive

Gene Family Information

  • ID HOM05D000064
  • #Genes/#Species 3993/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g004900.1

Descriptions

  • Description Ras-related protein Rab11D - Nicotiana tabacum (Common tobacco), RAB GTPase homolog A4A (RABA4a) | FUNCTIONS IN: GTP binding | INVOLVED IN: protein transport, small GTPase mediated signal transduction | LOCATED IN: plasma membrane, membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ras GTPase , Small GTP-binding protein , Small GTPase , Ras , Ras small GTPase, Rab type , Rab11-related | BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A4B
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032456
ISO
PLAZA Integrative Orthologyendocytic recycling AT4G39990
GO:0042546
ISO
PLAZA Integrative Orthologycell wall biogenesis AT5G65270

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005525
IEA
InterProGTP binding
GO:0003924
IEA
InterProGTPase activity
GO:0019900
ISO
PLAZA Integrative Orthologykinase binding AT4G39990

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031901
ISO
PLAZA Integrative Orthologyearly endosome membrane AT4G39990
GO:0090404
ISO
PLAZA Integrative Orthologypollen tube tip AT4G39990
GO:0035619
ISO
PLAZA Integrative Orthologyroot hair tip AT4G39990
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G65270
GO:0032588
ISO
PLAZA Integrative Orthologytrans-Golgi network membrane AT4G39990

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR005225 Small GTP-binding protein domain
IPR001806 Small GTPase
Mapman id Description
22.3.4.1.1 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase activities.A-class RAB GTPase