Gene: AT4G39990

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G39990
  • Transcript Identifier AT4G39990.1
  • Gene Type Coding gene
  • Location Chr4 : 18542722-18543779 : positive

Gene Family Information

  • ID HOM05D000064
  • #Genes/#Species 3993/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G39990.1
  • symbol RABA4B
  • Alias ATGB3,GTP-BINDING PROTEIN 3,ATRAB11G,ATRABA4B,ARABIDOPSIS THALIANA RAB GTPASE HOMOLOG A 4B
  • uniprot Q9SMQ6

Descriptions

  • Description RAB GTPase homolog A4B
  • Computational description RAB GTPase homolog A4B (RABA4B); FUNCTIONS IN: GTP binding; INVOLVED IN: endocytic recycling; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A4A (TAIR:AT5G65270.1); Has 29206 Blast hits to 29157 proteins in 775 species: Archae - 30; Bacteria - 156; Metazoa - 15160; Fungi - 4303; Plants - 3469; Viruses - 20; Other Eukaryotes - 6068 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015031
IEA
GOA Databaseprotein transport
GO:0042546
IMP
Gene Ontologycell wall biogenesis1
GO:0032456
IDA
Gene Ontologyendocytic recycling2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003924
IEA
Gene OntologyGTPase activity
GO:0003924
IEA
InterProGTPase activity
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0019900
IPI
Gene Ontologykinase binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005768
IEA
GOA Databaseendosome
GO:0005768
IBA
Gene Ontologyendosome4
GO:0016020
IEA
GOA Databasemembrane
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005886
HDA
Gene Ontologyplasma membrane5
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0005794
IBA
Gene OntologyGolgi apparatus4
GO:0031901
IEA
GOA Databaseearly endosome membrane
GO:0031901
IDA
Gene Ontologyearly endosome membrane6
GO:0035619
IDA
Gene Ontologyroot hair tip7
GO:0090404
IDA
Gene Ontologypollen tube tip8
GO:0032588
IDA
Gene Ontologytrans-Golgi network membrane8

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR005225 Small GTP-binding protein domain
IPR001806 Small GTPase
Mapman id Description
22.3.4.1.1 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase activities.A-class RAB GTPase