Gene: Sopen11g004220

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g004220
  • Transcript Identifier Sopen11g004220.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 2679973-2686512 : negative

Gene Family Information

  • ID HOM05D000064
  • #Genes/#Species 3993/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g004220.1

Descriptions

  • Description Encodes a novel Rab-like GTP-ase that is localized to the peripheral membrane of the endosome. | ARA6 | CONTAINS InterPro DOMAIN/s: Ras GTPase , Small GTP-binding protein , Small GTPase , Ras , Ras small GTPase, Rab type , Rab5-related | BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045022
ISO
PLAZA Integrative Orthologyearly endosome to late endosome transport AT3G54840

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003924
IEA
InterProGTPase activity
GO:0005525
IEA
InterProGTP binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G54840

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005769
ISO
PLAZA Integrative Orthologyearly endosome AT3G54840
GO:0005768
ISO
PLAZA Integrative Orthologyendosome AT3G54840
GO:0010009
ISO
PLAZA Integrative Orthologycytoplasmic side of endosome membrane AT3G54840

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001806 Small GTPase
IPR005225 Small GTP-binding protein domain
Mapman id Description
22.3.4.1.6 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase activities.F-class RAB GTPase
22.3.4.5.1 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB5-RAB7-dependent pathway.small GTPase (RAB5)