Gene: Sopen11g004220
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g004220
- Transcript Identifier Sopen11g004220.1
- Gene Type Coding gene
- Location Spenn-ch11 : 2679973-2686512 : negative
Gene Family Information
- ID HOM05D000064
- #Genes/#Species 3993/100
- Phylogenetic origin
- ID ORTHO05D006783
- #Genes/#Species 138/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen11g004220.1
Descriptions
- Description Encodes a novel Rab-like GTP-ase that is localized to the peripheral membrane of the endosome. | ARA6 | CONTAINS InterPro DOMAIN/s: Ras GTPase , Small GTP-binding protein , Small GTPase , Ras , Ras small GTPase, Rab type , Rab5-related | BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0045022 | ISO | PLAZA Integrative Orthology | early endosome to late endosome transport | AT3G54840 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003924 | IEA | InterPro | GTPase activity | |
GO:0005525 | IEA | InterPro | GTP binding | |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G54840 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005769 | ISO | PLAZA Integrative Orthology | early endosome | AT3G54840 |
GO:0005768 | ISO | PLAZA Integrative Orthology | endosome | AT3G54840 |
GO:0010009 | ISO | PLAZA Integrative Orthology | cytoplasmic side of endosome membrane | AT3G54840 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
22.3.4.1.6 | Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase activities.F-class RAB GTPase |
22.3.4.5.1 | Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB5-RAB7-dependent pathway.small GTPase (RAB5) |