Gene: Sopen11g004210

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g004210
  • Transcript Identifier Sopen11g004210.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 2678520-2678993 : negative

Gene Family Information

  • ID HOM05D000212
  • #Genes/#Species 1878/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g004210.1

Descriptions

  • Description BTB/POZ fold, E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At3), putative, E3 ubiquitin ligase | similar to fimbriata-associated protein fap1 GI:2673868 from (Antirrhinum majus. Interacts with F-box proteins. | SKP1-like 3 (SK3) | FUNCTIONS IN: ubiquitin-protein ligase activity, protein binding | INVOLVED IN: ubiquitin-dependent protein catabolic process | LOCATED IN: cellular_component unknown | EXPRESSED IN: sepal, seed coat, pedicel, valve | CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit , SKP1 component, dimerisation , SKP1 component , BTB/POZ fold , SKP1 component, POZ | BEST Arabidopsis thaliana protein match is: SKP1-like 4
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
IEA
InterProubiquitin-dependent protein catabolic process

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016073 SKP1 component, POZ domain
IPR016897 S-phase kinase-associated protein 1
IPR036296 SKP1-like, dimerisation domain superfamily
IPR001232 S-phase kinase-associated protein 1-like
IPR011333 SKP1/BTB/POZ domain superfamily
IPR016072 SKP1 component, dimerisation
Mapman id Description
19.2.2.8.1.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.target protein binding component SKP1/ASK1