Gene: Sopen11g001270
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g001270
- Transcript Identifier Sopen11g001270.1
- Gene Type Coding gene
- Location Spenn-ch11 : 239427-242423 : positive
Gene Family Information
- ID HOM05D003562
- #Genes/#Species 192/96
- Phylogenetic origin
- ID ORTHO05D004074
- #Genes/#Species 192/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Sopen11g001270.1
Descriptions
- Description Encodes a novel protein conserved in higher eukaryotes. Normal function of the protein is required for normal oscillator function during circadian rhythm. Mutant analyses also suggest a role in phytochrome B (phyB)-mediated light signaling. | SENSITIVITY TO RED LIGHT REDUCED 1 (SRR1) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: regulation of circadian rhythm, red, far-red light phototransduction | LOCATED IN: nucleus, cytoplasm | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Sensitivity To Red Light Reduced-like, SRR1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009585 | ISO | PLAZA Integrative Orthology | red, far-red light phototransduction | AT5G59560 |
GO:0010017 | ISO | PLAZA Integrative Orthology | red or far-red light signaling pathway | AT5G59560 |
GO:0007623 | ISO | PLAZA Integrative Orthology | circadian rhythm | AT5G59560 |
GO:0042752 | ISO | PLAZA Integrative Orthology | regulation of circadian rhythm | AT5G59560 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G59560 |
GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT5G59560 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |