Gene: Sopen11g001270

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g001270
  • Transcript Identifier Sopen11g001270.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 239427-242423 : positive

Gene Family Information

  • ID HOM05D003562
  • #Genes/#Species 192/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g001270.1

Descriptions

  • Description Encodes a novel protein conserved in higher eukaryotes. Normal function of the protein is required for normal oscillator function during circadian rhythm. Mutant analyses also suggest a role in phytochrome B (phyB)-mediated light signaling. | SENSITIVITY TO RED LIGHT REDUCED 1 (SRR1) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: regulation of circadian rhythm, red, far-red light phototransduction | LOCATED IN: nucleus, cytoplasm | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Sensitivity To Red Light Reduced-like, SRR1
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009585
ISO
PLAZA Integrative Orthologyred, far-red light phototransduction AT5G59560
GO:0010017
ISO
PLAZA Integrative Orthologyred or far-red light signaling pathway AT5G59560
GO:0007623
ISO
PLAZA Integrative Orthologycircadian rhythm AT5G59560
GO:0042752
ISO
PLAZA Integrative Orthologyregulation of circadian rhythm AT5G59560

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G59560
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G59560

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012942 SRR1-like domain
IPR040044 SRR1-like protein
Mapman id Description
35.1 not assigned.annotated