Gene: Sopen10g029090
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen10g029090
- Transcript Identifier Sopen10g029090.1
- Gene Type Coding gene
- Location Spenn-ch10 : 76998339-77006554 : positive
Gene Family Information
- ID HOM05D002509
- #Genes/#Species 271/100
- Phylogenetic origin
- ID ORTHO05D002758
- #Genes/#Species 264/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen10g029090.1
Descriptions
- Description Encodes a homolog of the animal DP protein. DP, in animals, forms a heterodimer with E2F and plays a central role in G1/S transition in the cell division cycle. DPB has been shown to interact with non phosphorylated E2Fc | when E2Fc is phosphorylated, the formation of the E2Fc/DPB heterodimer is lost. | DPB | CONTAINS InterPro DOMAIN/s: Transcription factor E2F/dimerisation partner (TDP) , Transcription factor DP, C-terminal , Winged helix-turn-helix transcription repressor DNA-binding , Transcription factor DP , Transcription factor DP, subgroup | BEST Arabidopsis thaliana protein match is: Transcription factor DP ., Transcription factor DP, C-terminal
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051726 | IEA | InterPro | regulation of cell cycle | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0042023 | ISO | PLAZA Integrative Orthology | DNA endoreduplication | AT5G03415 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G03415 |
| GO:0046982 | ISO | PLAZA Integrative Orthology | protein heterodimerization activity | AT5G03415 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005667 | IEA | InterPro | transcription regulator complex | |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G03415 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT5G03415 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR037241 | E2F-DP heterodimerization region |
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR015648 | Transcription factor DP |
| IPR003316 | E2F/DP family, winged-helix DNA-binding domain |
| IPR014889 | Transcription factor DP, C-terminal |
| IPR036390 | Winged helix DNA-binding domain superfamily |
| IPR038168 | Transcription factor DP, C-terminal domain superfamily |
| Mapman id | Description |
|---|---|
| 13.1.2.1.4.2 | Cell cycle organisation.cell cycle control.regulation.MuvB/DREAM regulatory complexes.E2F-DP dimer.component DPa/b |