Gene: AT5G03415

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G03415
  • Transcript Identifier AT5G03415.2
  • Gene Type Coding gene
  • Location Chr5 : 842842-845200 : positive

Gene Family Information

  • ID HOM05D002509
  • #Genes/#Species 271/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G03415.2
  • symbol DPB
  • uniprot Q9FNY2

Descriptions

  • Description Transcription factor DP
  • Computational description DPB; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), Transcription factor DP, C-terminal (InterPro:IPR014889), Transcription factor DP (InterPro:IPR015648), Transcription factor DP, subgroup (InterPro:IPR016556); BEST Arabidopsis thaliana protein match is: Transcription factor DP (TAIR:AT5G02470.3); Has 509 Blast hits to 501 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 249; Fungi - 7; Plants - 91; Viruses - 0; Other Eukaryotes - 162 (source: NCBI BLink).
  • Computational description DPB; CONTAINS InterPro DOMAIN/s: Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), Transcription factor DP, C-terminal (InterPro:IPR014889), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor DP (InterPro:IPR015648), Transcription factor DP, subgroup (InterPro:IPR016556); BEST Arabidopsis thaliana protein match is: Transcription factor DP (TAIR:AT5G02470.3).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006357
IBA
Gene Ontologyregulation of transcription by RNA polymerase II1
GO:0051726
IEA
Gene Ontologyregulation of cell cycle
GO:0051726
IEA
InterProregulation of cell cycle
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0007049
IEA
GOA Databasecell cycle
GO:0042023
IMP
Gene OntologyDNA endoreduplication2
GO:0000082
ISS
Gene OntologyG1/S transition of mitotic cell cycle3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0000977
IBA
Gene OntologyRNA polymerase II transcription regulatory region sequence-specific DNA binding1
GO:0000981
IBA
Gene OntologyDNA-binding transcription factor activity, RNA polymerase II-specific1
GO:0046982
IPI
Gene Ontologyprotein heterodimerization activity2
GO:0005515
IPI
Gene Ontologyprotein binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005667
IEA
Gene Ontologytranscription regulator complex
GO:0005667
IEA
InterProtranscription regulator complex
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM, IBA
Gene Ontologynucleus1 4
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IDA
Gene Ontologycytoplasm4

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014889 Transcription factor DP, C-terminal
IPR038168 Transcription factor DP, C-terminal domain superfamily
IPR036390 Winged helix DNA-binding domain superfamily
IPR037241 E2F-DP heterodimerization region
IPR003316 E2F/DP family, winged-helix DNA-binding domain
IPR015648 Transcription factor DP
IPR036388 Winged helix-like DNA-binding domain superfamily
Mapman id Description
13.1.2.1.4.2 Cell cycle organisation.cell cycle control.regulation.MuvB/DREAM regulatory complexes.E2F-DP dimer.component DPa/b