Gene: Sopen09g006650

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen09g006650
  • Transcript Identifier Sopen09g006650.1
  • Gene Type Coding gene
  • Location Spenn-ch09 : 5447531-5450895 : positive

Gene Family Information

  • ID HOM05D007241
  • #Genes/#Species 108/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen09g006650.1

Descriptions

  • Description plastid transcriptionally active 13 (PTAC13) | FUNCTIONS IN: transcription elongation regulator activity | INVOLVED IN: positive regulation of RNA elongation from RNA polymerase II promoter | LOCATED IN: plastid chromosome, nucleoid | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Translation protein SH3-like , Transcription antitermination protein, NusG, N-terminal , Translation protein SH3-like, subgroup , KOW
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009508
ISO
PLAZA Integrative Orthologyplastid chromosome AT3G09210
GO:0042644
ISO
PLAZA Integrative Orthologychloroplast nucleoid AT3G09210

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006645 NusG, N-terminal
IPR036735 NusG, N-terminal domain superfamily
IPR014722 Ribosomal protein L2, domain 2
IPR008991 Translation protein SH3-like domain superfamily
IPR043425 NusG-like
IPR005824 KOW
Mapman id Description
15.6.1.2.3.4 RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factor components.component TAC13