Gene: AT3G09210

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G09210
  • Transcript Identifier AT3G09210.1
  • Gene Type Coding gene
  • Location Chr3 : 2825422-2826850 : negative

Gene Family Information

  • ID HOM05D007241
  • #Genes/#Species 108/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G09210.1
  • symbol PTAC13
  • uniprot Q94AA3

Descriptions

  • Description plastid transcriptionally active 13
  • Computational description plastid transcriptionally active 13 (PTAC13); FUNCTIONS IN: transcription elongation regulator activity; INVOLVED IN: positive regulation of RNA elongation from RNA polymerase II promoter; LOCATED IN: plastid chromosome, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Transcription antitermination protein, NusG, N-terminal (InterPro:IPR006645), Translation protein SH3-like, subgroup (InterPro:IPR014722), KOW (InterPro:IPR005824); Has 3797 Blast hits to 3795 proteins in 1334 species: Archae - 0; Bacteria - 2562; Metazoa - 0; Fungi - 2; Plants - 31; Viruses - 0; Other Eukaryotes - 1202 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
Gene Ontologyregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0042644
IDA
GOA Databasechloroplast nucleoid
GO:0042644
HDA
Gene Ontologychloroplast nucleoid1
GO:0009508
IDA
GOA Databaseplastid chromosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006645 NusG, N-terminal
IPR043425 NusG-like
IPR036735 NusG, N-terminal domain superfamily
IPR014722 Ribosomal protein L2, domain 2
IPR008991 Translation protein SH3-like domain superfamily
Mapman id Description
15.6.1.2.3.4 RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factor components.component TAC13