Gene: Sopen08g029580
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen08g029580
- Transcript Identifier Sopen08g029580.1
- Gene Type Coding gene
- Location Spenn-ch08 : 68893071-68898899 : negative
Gene Family Information
- ID HOM05D001451
- #Genes/#Species 435/99
- Phylogenetic origin
- ID ORTHO05D001338
- #Genes/#Species 429/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen08g029580.1
Descriptions
- Description ubiquitin-conjugating enzyme 5 (UBC5) | CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like , Ubiquitin-conjugating enzyme, E2 , Ubiquitin-conjugating enzyme | BEST Arabidopsis thaliana protein match is: ubiquitin conjugating enzyme 4
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009408 | ISO | PLAZA Integrative Orthology | response to heat | AT5G41340 |
| GO:0006511 | ISO | PLAZA Integrative Orthology | ubiquitin-dependent protein catabolic process | AT1G63800 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004842 | ISO | PLAZA Integrative Orthology | ubiquitin-protein transferase activity | AT1G63800 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G63800 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.2.1.3.1.3 | Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Pro/N-degron pathway.GID ubiquitination complex.ubiquitin-conjugating component GID3 |
| 19.2.2.1.3 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-conjugating E2 protein (UBC) |