Gene: AT1G63800

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G63800
  • Transcript Identifier AT1G63800.2
  • Gene Type Coding gene
  • Location Chr1 : 23667888-23668836 : negative

Gene Family Information

  • ID HOM05D001451
  • #Genes/#Species 435/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G63800.2
  • symbol UBC5
  • uniprot P42749

Descriptions

  • Description ubiquitin-conjugating enzyme 5
  • Computational description ubiquitin-conjugating enzyme 5 (UBC5); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), Ubiquitin-conjugating enzyme (InterPro:IPR015581); BEST Arabidopsis thaliana protein match is: ubiquitin conjugating enzyme 4 (TAIR:AT5G41340.1); Has 8752 Blast hits to 8751 proteins in 386 species: Archae - 0; Bacteria - 0; Metazoa - 4011; Fungi - 1743; Plants - 1591; Viruses - 20; Other Eukaryotes - 1387 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
IDA
IBA
TAS
Gene Ontologyubiquitin-dependent protein catabolic process1 2 3
GO:0000209
IBA
Gene Ontologyprotein polyubiquitination3
GO:0016567
IEA
GOA Databaseprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IDA
Gene Ontologyubiquitin-protein transferase activity2
GO:0061631
IEA
GOA Databaseubiquitin conjugating enzyme activity
GO:0061631
IBA
Gene Ontologyubiquitin conjugating enzyme activity3
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0005524
IEA
GOA DatabaseATP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM, IBA
Gene Ontologynucleus3
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005829
IDA
GOA Databasecytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016135 Ubiquitin-conjugating enzyme/RWD-like
IPR000608 Ubiquitin-conjugating enzyme E2
Mapman id Description
19.2.1.3.1.3 Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Pro/N-degron pathway.GID ubiquitination complex.ubiquitin-conjugating component GID3
19.2.2.1.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-conjugating E2 protein (UBC)