Gene: Sopen08g016270
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen08g016270
- Transcript Identifier Sopen08g016270.1
- Gene Type Coding gene
- Location Spenn-ch08 : 50018256-50029575 : negative
Gene Family Information
- ID HOM05D000002
- #Genes/#Species 26594/98
- Phylogenetic origin
- ID ORTHO05D000001
- #Genes/#Species 28434/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen08g016270.1
Descriptions
- Description Major facilitator superfamily protein | FUNCTIONS IN: transporter activity | INVOLVED IN: response to jasmonic acid stimulus, response to wounding | LOCATED IN: membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site , Oligopeptide transporter , Major facilitator superfamily, general substrate transporter | BEST Arabidopsis thaliana protein match is: nitrate transporter 1.1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0055085 | IEA | InterPro | transmembrane transport | |
| GO:0015074 | IEA | InterPro | DNA integration |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0022857 | IEA | InterPro | transmembrane transporter activity | |
| GO:0003676 | IEA | InterPro | nucleic acid binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | InterPro | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000109 | Proton-dependent oligopeptide transporter family |
| IPR036397 | Ribonuclease H superfamily |
| IPR036259 | MFS transporter superfamily |
| IPR025724 | GAG-pre-integrase domain |
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR013103 | Reverse transcriptase, RNA-dependent DNA polymerase |
| IPR029472 | Retrotransposon Copia-like, N-terminal |
| IPR012337 | Ribonuclease H-like superfamily |
| IPR001584 | Integrase, catalytic core |
| Mapman id | Description |
|---|---|
| 24.2.2.9 | Solute transport.carrier-mediated transport.MFS superfamily.anion transporter (NRT1/PTR) |