Gene: Sopen07g024500

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g024500
  • Transcript Identifier Sopen07g024500.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 69913540-69920589 : positive

Gene Family Information

  • ID HOM05D001529
  • #Genes/#Species 415/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g024500.1

Descriptions

  • Description Encodes a dual localized threonyl-tRNA synthetase found both in the mitochondrion and the chloroplast. Plants mutated in this gene terminate as embryos in the globular stage. | EMBRYO DEFECTIVE 2761 (EMB2761) | FUNCTIONS IN: ligase activity, forming aminoacyl-tRNA and related compounds, nucleotide binding, aminoacyl-tRNA ligase activity, threonine-tRNA ligase activity, ATP binding | INVOLVED IN: threonyl-tRNA aminoacylation, embryo development ending in seed dormancy | LOCATED IN: mitochondrion, chloroplast stroma, chloroplast | CONTAINS InterPro DOMAIN/s: Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain , Threonyl-tRNA synthetase, class IIa , Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain , Aminoacyl-tRNA synthetase, class II, conserved domain , Threonyl/alanyl tRNA synthetase, SAD , Anticodon-binding , Threonyl-tRNA synthetase, class IIa, conserved region | BEST Arabidopsis thaliana protein match is: Threonyl-tRNA synthetase
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0006435
IEA
InterProthreonyl-tRNA aminoacylation
GO:0043039
IEA
InterProtRNA aminoacylation
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT2G04842

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
InterPronucleotide binding
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0005524
IEA
InterProATP binding
GO:0004829
IEA
InterProthreonine-tRNA ligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
InterProcytoplasm
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT2G04842
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G04842
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT2G04842

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
IPR002320 Threonine-tRNA ligase, class IIa
IPR033728 Threonine-tRNA ligase catalytic core domain
IPR012947 Threonyl/alanyl tRNA synthetase, SAD
IPR004154 Anticodon-binding
IPR036621 Anticodon-binding domain superfamily
IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily
Mapman id Description
17.2.19 Protein biosynthesis.aminoacyl-tRNA synthetase activities.threonine-tRNA ligase