Gene: AT2G04842

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G04842
  • Transcript Identifier AT2G04842.1
  • Gene Type Coding gene
  • Location Chr2 : 1698466-1701271 : negative

Gene Family Information

  • ID HOM05D001529
  • #Genes/#Species 415/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G04842.1
  • symbol EMB2761
  • full_name EMBRYO DEFECTIVE 2761
  • uniprot F4IFC5

Descriptions

  • Description threonyl-tRNA synthetase, putative / threonine-tRNA ligase
  • Computational description EMBRYO DEFECTIVE 2761 (EMB2761); FUNCTIONS IN: ligase activity, forming aminoacyl-tRNA and related compounds, nucleotide binding, aminoacyl-tRNA ligase activity, threonine-tRNA ligase activity, ATP binding; INVOLVED IN: threonyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; CONTAINS InterPro DOMAIN/s: Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Threonyl-tRNA synthetase, class IIa (InterPro:IPR002320), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), Anticodon-binding (InterPro:IPR004154), Threonyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR018158); BEST Arabidopsis thaliana protein match is: Threonyl-tRNA synthetase (TAIR:AT5G26830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043039
IEA
GOA DatabasetRNA aminoacylation
GO:0043039
IEA
InterProtRNA aminoacylation
GO:0006418
IEA
GOA DatabasetRNA aminoacylation for protein translation
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0006435
IEA
GOA Databasethreonyl-tRNA aminoacylation
GO:0006435
IBA
Gene Ontologythreonyl-tRNA aminoacylation1
GO:0006435
IEA
InterProthreonyl-tRNA aminoacylation
GO:0006412
IEA
GOA Databasetranslation
GO:0009793
IMP
Gene Ontologyembryo development ending in seed dormancy2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004829
IEA
GOA Databasethreonine-tRNA ligase activity
GO:0004829
IBA
Gene Ontologythreonine-tRNA ligase activity1
GO:0004829
IEA
InterProthreonine-tRNA ligase activity
GO:0016874
IEA
GOA Databaseligase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0004812
IEA
GOA Databaseaminoacyl-tRNA ligase activity
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IEA
InterProcytoplasm
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
IDA, HDA
ISM
Gene Ontologychloroplast3 4
GO:0009536
IEA
GOA Databaseplastid
GO:0009570
IDA
GOA Databasechloroplast stroma
GO:0009570
HDA
IBA
Gene Ontologychloroplast stroma1 5
GO:0005739
IEA
GOA Databasemitochondrion
GO:0005739
IDA
IBA
Gene Ontologymitochondrion1 3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR033728 Threonine-tRNA ligase catalytic core domain
IPR036621 Anticodon-binding domain superfamily
IPR002320 Threonine-tRNA ligase, class IIa
IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
IPR012947 Threonyl/alanyl tRNA synthetase, SAD
IPR004154 Anticodon-binding
IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily
Mapman id Description
17.2.19 Protein biosynthesis.aminoacyl-tRNA synthetase activities.threonine-tRNA ligase