Gene: Sopen06g033450
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen06g033450
- Transcript Identifier Sopen06g033450.1
- Gene Type Coding gene
- Location Spenn-ch06 : 58913393-58920271 : positive
Gene Family Information
- ID HOM05D000366
- #Genes/#Species 1311/100
- Phylogenetic origin
- ID ORTHO05D000437
- #Genes/#Species 931/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen06g033450.1
Descriptions
- Description PHD finger transcription factor, putative | FUNCTIONS IN: RNA binding, DNA binding, zinc ion binding | INVOLVED IN: N-terminal protein myristoylation, regulation of transcription, DNA-dependent, response to chitin | LOCATED IN: endomembrane system, nucleus | EXPRESSED IN: 7 plant structures | EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage | CONTAINS InterPro DOMAIN/s: Tudor-like, plant , Agenet , Zinc finger, PHD-type , Zinc finger, FYVE/PHD-type , Acyl-CoA N-acyltransferase , Zinc finger, PHD-finger | BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR019787 | Zinc finger, PHD-finger |
| IPR017956 | AT hook, DNA-binding motif |
| IPR001965 | Zinc finger, PHD-type |
| IPR032308 | Jas TPL-binding domain |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR008395 | Agenet-like domain |
| IPR011011 | Zinc finger, FYVE/PHD-type |
| IPR014002 | Agenet domain, plant type |
| IPR016181 | Acyl-CoA N-acyltransferase |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |