Gene: Sopen06g031140

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g031140
  • Transcript Identifier Sopen06g031140.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 57117054-57123401 : positive

Gene Family Information

  • ID HOM05D000234
  • #Genes/#Species 1784/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g031140.1

Descriptions

  • Description ARGONAUTE 5 (AGO5) | FUNCTIONS IN: nucleic acid binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 10 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 , Stem cell self-renewal protein Piwi , Polynucleotidyl transferase, ribonuclease H fold , Argonaute/Dicer protein, PAZ | BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031047
ISO
PLAZA Integrative Orthologygene silencing by RNA Solyc06g074730.4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003676
IEA
InterPronucleic acid binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012337 Ribonuclease H-like superfamily
IPR003100 PAZ domain
IPR014811 Argonaute, linker 1 domain
IPR036397 Ribonuclease H superfamily
IPR032474 Protein argonaute, N-terminal
IPR036085 PAZ domain superfamily
IPR032472 Argonaute linker 2 domain
IPR003165 Piwi domain
Mapman id Description
35.1 not assigned.annotated