Gene: Sopen03g023210

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g023210
  • Transcript Identifier Sopen03g023210.2
  • Gene Type Coding gene
  • Location Spenn-ch03 : 54821418-54831969 : positive

Gene Family Information

  • ID HOM05D001433
  • #Genes/#Species 439/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g023210.2

Descriptions

  • Description NADH-dependent glutamate synthase | NADH-dependent glutamate synthase 1 (GLT1) | CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase , Glutamine amidotransferase, class-II , Aldolase-type TIM barrel , Glutamate synthase, alpha subunit, C-terminal , Glutamate synthase, NADH/NADPH, small subunit 1 , Adrenodoxin reductase , Fumarate reductase, C-terminal , Glutamate synthase, central-N , NAD(P)-binding domain , Glutamate synthase, eukaryotic , Alpha-helical ferredoxin , Glutamate synthase, central-C , Glutamine amidotransferase, type II | BEST Arabidopsis thaliana protein match is: glutamate synthase 1 ., Glutamate synthase (NADH), chloroplast precursor (EC 1.4.1.14) (NADH-GOGAT) - Medicago sativa (Alfalfa), Aldolase-type TIM barrel
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0060359
ISO
PLAZA Integrative Orthologyresponse to ammonium ion Os01g0681900
GO:0042128
ISO
PLAZA Integrative Orthologynitrate assimilation AT5G53460
GO:0048589
ISO
PLAZA Integrative Orthologydevelopmental growth AT5G53460
GO:0019676
ISO
PLAZA Integrative Orthologyammonia assimilation cycle AT5G53460
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT5G53460
GO:0006807
IEA
InterPronitrogen compound metabolic process
GO:0006537
IEA
InterProglutamate biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015930
IEA
InterProglutamate synthase activity
GO:0016638
IEA
InterProoxidoreductase activity, acting on the CH-NH2 group of donors
GO:0003824
IEA
InterProcatalytic activity
GO:0051536
IEA
InterProiron-sulfur cluster binding
GO:0050660
IEA
InterProflavin adenine dinucleotide binding
GO:0016040
IEA
InterProglutamate synthase (NADH) activity
GO:0010181
IEA
InterProFMN binding
GO:0005506
IEA
InterProiron ion binding
GO:0016491
IEA
InterProoxidoreductase activity
GO:0016639
IEA
InterProoxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT5G53460
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G53460
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G53460

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013785 Aldolase-type TIM barrel
IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1
IPR023753 FAD/NAD(P)-binding domain
IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily
IPR012220 Glutamate synthase, eukaryotic
IPR017932 Glutamine amidotransferase type 2 domain
IPR028261 Dihydroprymidine dehydrogenase domain II
IPR009051 Alpha-helical ferredoxin
IPR029055 Nucleophile aminohydrolases, N-terminal
IPR006982 Glutamate synthase, central-N
IPR002489 Glutamate synthase, alpha subunit, C-terminal
IPR002932 Glutamate synthase domain
IPR036188 FAD/NAD(P)-binding domain superfamily
Mapman id Description
25.1.4.2.2 Nutrient uptake.nitrogen assimilation.ammonium assimilation.glutamate synthase activities.NADH-dependent glutamate synthase (NADH-GOGAT)