Gene: Sopen03g007350

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g007350
  • Transcript Identifier Sopen03g007350.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 6478394-6484215 : positive

Gene Family Information

  • ID HOM05D000844
  • #Genes/#Species 707/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g007350.1

Descriptions

  • Description Phenylalanine ammonia-lyase 1 (EC 4.3.1.5) - Solanum tuberosum (Potato), Encodes PAL1, a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4). | PHE ammonia lyase 1 (PAL1) | FUNCTIONS IN: phenylalanine ammonia-lyase activity | INVOLVED IN: in 10 processes | LOCATED IN: cytoplasm | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Phenylalanine/histidine ammonia-lyase , Phenylalanine/histidine ammonia-lyases, active site , L-Aspartase-like , Phenylalanine ammonia-lyase | BEST Arabidopsis thaliana protein match is: phenylalanine ammonia-lyase 2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006952
ISO
PLAZA Integrative Orthologydefense response AT5G04230
GO:0010224
ISO
PLAZA Integrative Orthologyresponse to UV-B AT2G37040
GO:0016598
ISO
PLAZA Integrative Orthologyprotein arginylation Zm00001eb077230
GO:0009819
ISO
PLAZA Integrative Orthologydrought recovery AT2G37040
GO:0046244
ISO
PLAZA Integrative Orthologysalicylic acid catabolic process AT2G37040
GO:0046274
ISO
PLAZA Integrative Orthologylignin catabolic process AT2G37040
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT3G53260
GO:0009739
ISO
PLAZA Integrative Orthologyresponse to gibberellin Zm00001eb077230
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT2G37040
GO:0046898
ISO
PLAZA Integrative Orthologyresponse to cycloheximide Zm00001eb077230
GO:0080167
ISO
PLAZA Integrative Orthologyresponse to karrikin AT3G53260
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT5G04230
GO:0009699
ISO
PLAZA Integrative Orthologyphenylpropanoid biosynthetic process Zm00001eb077230
GO:0006559
IEA
InterProL-phenylalanine catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G10340
GO:0003824
IEA
InterProcatalytic activity
GO:0045548
ISO
PLAZA Integrative Orthologyphenylalanine ammonia-lyase activity Zm00001eb077230
GO:0016841
IEA
InterProammonia-lyase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G53260
GO:0005737
IEA
InterProcytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001106 Aromatic amino acid lyase
IPR023144 Phenylalanine ammonia-lyase, shielding domain superfamily
IPR024083 Fumarase/histidase, N-terminal
IPR008948 L-Aspartase-like
IPR005922 Phenylalanine ammonia-lyase
Mapman id Description
9.2.1.1.1 Secondary metabolism.phenolics.p-coumaroyl-CoA biosynthesis.phenylalanine ammonia lyase activity.phenylalanine ammonia lyase (PAL)