Gene: AT3G10340
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G10340
- Transcript Identifier AT3G10340.1
- Gene Type Coding gene
- Location Chr3 : 3204260-3207809 : positive
Gene Family Information
- ID HOM05D000844
- #Genes/#Species 707/96
- Phylogenetic origin
- ID ORTHO05D000680
- #Genes/#Species 684/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G10340.1
- symbol PAL4
- uniprot Q9SS45
Descriptions
- Description phenylalanine ammonia-lyase 4
- Computational description phenylalanine ammonia-lyase 4 (PAL4); FUNCTIONS IN: ammonia-lyase activity, catalytic activity; INVOLVED IN: L-phenylalanine catabolic process, biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Phenylalanine/histidine ammonia-lyase (InterPro:IPR001106), Phenylalanine/histidine ammonia-lyases, active site (InterPro:IPR022313), L-Aspartase-like (InterPro:IPR008948), Phenylalanine ammonia-lyase (InterPro:IPR005922); BEST Arabidopsis thaliana protein match is: PHE ammonia lyase 1 (TAIR:AT2G37040.1); Has 4898 Blast hits to 4876 proteins in 1415 species: Archae - 40; Bacteria - 2975; Metazoa - 80; Fungi - 127; Plants - 1177; Viruses - 0; Other Eukaryotes - 499 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0016598 | ISO | PLAZA Integrative Orthology | protein arginylation | Zm00001eb077230 |
GO:0046898 | ISO | PLAZA Integrative Orthology | response to cycloheximide | Zm00001eb077230 |
GO:0009699 | ISO | PLAZA Integrative Orthology | phenylpropanoid biosynthetic process | Zm00001eb077230 |
GO:0009739 | ISO | PLAZA Integrative Orthology | response to gibberellin | Zm00001eb077230 |
GO:0006559 | IEA | Gene Ontology | L-phenylalanine catabolic process | |
GO:0006559 | IEA | InterPro | L-phenylalanine catabolic process | |
GO:0009698 | IEA | GOA Database | phenylpropanoid metabolic process | |
GO:0009800 | IEA | Gene Ontology | cinnamic acid biosynthetic process |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003824 | IEA | GOA Database | catalytic activity | |
GO:0003824 | IEA | InterPro | catalytic activity | |
GO:0016841 | IEA | GOA Database | ammonia-lyase activity | |
GO:0016841 | IBA | Gene Ontology | ammonia-lyase activity | 1 |
GO:0016841 | IEA | InterPro | ammonia-lyase activity | |
GO:0016829 | IEA | GOA Database | lyase activity | |
GO:0045548 | IEA | GOA Database | phenylalanine ammonia-lyase activity | |
GO:0045548 | IBA | Gene Ontology | phenylalanine ammonia-lyase activity | 1 |
GO:0005515 | IPI | Gene Ontology | protein binding | 2 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005737 | IEA | GOA Database | cytoplasm | |
GO:0005737 | ISM | Gene Ontology | cytoplasm | |
GO:0005737 | IEA | InterPro | cytoplasm |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
9.2.1.1.1 | Secondary metabolism.phenolics.p-coumaroyl-CoA biosynthesis.phenylalanine ammonia lyase activity.phenylalanine ammonia lyase (PAL) |