Gene: AT3G53260

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G53260
  • Transcript Identifier AT3G53260.1
  • Gene Type Coding gene
  • Location Chr3 : 19744256-19746619 : negative

Gene Family Information

  • ID HOM05D000844
  • #Genes/#Species 707/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G53260.1
  • symbol PAL2
  • Alias ATPAL2
  • uniprot P45724

Descriptions

  • Description phenylalanine ammonia-lyase 2
  • Computational description phenylalanine ammonia-lyase 2 (PAL2); FUNCTIONS IN: phenylalanine ammonia-lyase activity; INVOLVED IN: response to oxidative stress, response to karrikin, phenylpropanoid biosynthetic process, response to wounding, defense response; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanine/histidine ammonia-lyase (InterPro:IPR001106), Phenylalanine/histidine ammonia-lyases, active site (InterPro:IPR022313), L-Aspartase-like (InterPro:IPR008948), Phenylalanine ammonia-lyase (InterPro:IPR005922); BEST Arabidopsis thaliana protein match is: PHE ammonia lyase 1 (TAIR:AT2G37040.1); Has 4835 Blast hits to 4816 proteins in 1397 species: Archae - 40; Bacteria - 2928; Metazoa - 79; Fungi - 127; Plants - 1172; Viruses - 0; Other Eukaryotes - 489 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016598
ISO
PLAZA Integrative Orthologyprotein arginylation Zm00001eb077230
GO:0046898
ISO
PLAZA Integrative Orthologyresponse to cycloheximide Zm00001eb077230
GO:0009739
ISO
PLAZA Integrative Orthologyresponse to gibberellin Zm00001eb077230
GO:0006559
IEA
Gene OntologyL-phenylalanine catabolic process
GO:0006559
IEA
InterProL-phenylalanine catabolic process
GO:0009698
IEA
GOA Databasephenylpropanoid metabolic process
GO:0080167
IEP
GOA Databaseresponse to karrikin
GO:0009699
TAS
Gene Ontologyphenylpropanoid biosynthetic process1
GO:0009611
TAS
Gene Ontologyresponse to wounding1
GO:0006952
TAS
Gene Ontologydefense response1
GO:0006979
IEP
Gene Ontologyresponse to oxidative stress2
GO:0009800
IEA
Gene Ontologycinnamic acid biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016841
IEA
GOA Databaseammonia-lyase activity
GO:0016841
IBA
Gene Ontologyammonia-lyase activity3
GO:0016841
IEA
InterProammonia-lyase activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0016829
IEA
GOA Databaselyase activity
GO:0045548
IEA
GOA Databasephenylalanine ammonia-lyase activity
GO:0045548
ISS, IBA
TAS
Gene Ontologyphenylalanine ammonia-lyase activity1 3
GO:0005515
IPI
Gene Ontologyprotein binding4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005737
IEA
InterProcytoplasm
GO:0005829
IDA
GOA Databasecytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001106 Aromatic amino acid lyase
IPR008948 L-Aspartase-like
IPR024083 Fumarase/histidase, N-terminal
IPR005922 Phenylalanine ammonia-lyase
IPR023144 Phenylalanine ammonia-lyase, shielding domain superfamily
Mapman id Description
9.2.1.1.1 Secondary metabolism.phenolics.p-coumaroyl-CoA biosynthesis.phenylalanine ammonia lyase activity.phenylalanine ammonia lyase (PAL)