Gene: Sopen02g025670

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g025670
  • Transcript Identifier Sopen02g025670.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 48761058-48777658 : negative

Gene Family Information

  • ID HOM05D006131
  • #Genes/#Species 129/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g025670.1

Descriptions

  • Description EMBRYO DEFECTIVE 2369 (EMB2369) | FUNCTIONS IN: aminoacyl-tRNA ligase activity, nucleotide binding, leucine-tRNA ligase activity, ATP binding | INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy | LOCATED IN: mitochondrion, chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site , Rossmann-like alpha/beta/alpha sandwich fold , Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial , Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding , Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing , Aminoacyl-tRNA synthetase, class Ia , Aminoacyl-tRNA synthetase, class 1a, anticodon-binding | BEST Arabidopsis thaliana protein match is: tRNA synthetase class I (I, L, M and V) family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006429
IEA
InterProleucyl-tRNA aminoacylation
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT4G04350

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
InterPronucleotide binding
GO:0004823
IEA
InterProleucine-tRNA ligase activity
GO:0005524
IEA
InterProATP binding
GO:0002161
IEA
InterProaminoacyl-tRNA editing activity
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT4G04350
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G04350
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT4G04350

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002302 Leucine-tRNA ligase
IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
IPR025709 Leucyl-tRNA synthetase, editing domain
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
IPR015413 Methionyl/Leucyl tRNA synthetase
IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
IPR002300 Aminoacyl-tRNA synthetase, class Ia
IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
Mapman id Description
17.2.12 Protein biosynthesis.aminoacyl-tRNA synthetase activities.leucine-tRNA ligase