Gene: AT4G04350

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G04350
  • Transcript Identifier AT4G04350.1
  • Gene Type Coding gene
  • Location Chr4 : 2128129-2133030 : positive

Gene Family Information

  • ID HOM05D006131
  • #Genes/#Species 129/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G04350.1
  • symbol EMB2369
  • full_name EMBRYO DEFECTIVE 2369
  • uniprot Q9XEA0

Descriptions

  • Description tRNA synthetase class I (I, L, M and V) family protein
  • Computational description EMBRYO DEFECTIVE 2369 (EMB2369); FUNCTIONS IN: aminoacyl-tRNA ligase activity, nucleotide binding, leucine-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial (InterPro:IPR002302), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080); BEST Arabidopsis thaliana protein match is: tRNA synthetase class I (I, L, M and V) family protein (TAIR:AT5G49030.1); Has 40727 Blast hits to 36917 proteins in 3154 species: Archae - 1372; Bacteria - 23600; Metazoa - 846; Fungi - 790; Plants - 334; Viruses - 3; Other Eukaryotes - 13782 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006418
IEA
GOA DatabasetRNA aminoacylation for protein translation
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0006429
IEA
GOA Databaseleucyl-tRNA aminoacylation
GO:0006429
IBA
Gene Ontologyleucyl-tRNA aminoacylation1
GO:0006429
IEA
InterProleucyl-tRNA aminoacylation
GO:0006412
IEA
GOA Databasetranslation
GO:0106074
IEA
GOA Databaseaminoacyl-tRNA metabolism involved in translational fidelity
GO:0009793
IMP
NAS
Gene Ontologyembryo development ending in seed dormancy2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0002161
IEA
Gene Ontologyaminoacyl-tRNA editing activity
GO:0002161
IEA
InterProaminoacyl-tRNA editing activity
GO:0004812
IEA
GOA Databaseaminoacyl-tRNA ligase activity
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004823
IEA
GOA Databaseleucine-tRNA ligase activity
GO:0004823
IBA
Gene Ontologyleucine-tRNA ligase activity1
GO:0004823
IEA
InterProleucine-tRNA ligase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0016874
IEA
GOA Databaseligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009536
IEA
GOA Databaseplastid
GO:0009570
IDA
GOA Databasechloroplast stroma
GO:0009570
HDA
Gene Ontologychloroplast stroma3
GO:0005739
IEA
GOA Databasemitochondrion
GO:0005739
IDA
Gene Ontologymitochondrion4
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
IDA, HDA
Gene Ontologychloroplast4 5
GO:0005829
IBA
Gene Ontologycytosol1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002302 Leucine-tRNA ligase
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
IPR015413 Methionyl/Leucyl tRNA synthetase
IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
IPR002300 Aminoacyl-tRNA synthetase, class Ia
IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
IPR025709 Leucyl-tRNA synthetase, editing domain
Mapman id Description
17.2.12 Protein biosynthesis.aminoacyl-tRNA synthetase activities.leucine-tRNA ligase