Gene: Sopen01g051540

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g051540
  • Transcript Identifier Sopen01g051540.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 107115882-107133624 : negative

Gene Family Information

  • ID HOM05D004755
  • #Genes/#Species 155/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g051540.1

Descriptions

  • Description transducin family protein / WD-40 repeat family protein | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , PLAA family ubiquitin binding, PFU , WD40 repeat, conserved site , WD40 repeat , G-protein beta WD-40 repeat, region , WD40 repeat-like-containing domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup , PUL | BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G18860
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G18860

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011989 Armadillo-like helical
IPR038122 PFU domain superfamily
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR020472 G-protein beta WD-40 repeat
IPR001680 WD40 repeat
IPR013535 PUL domain
IPR036322 WD40-repeat-containing domain superfamily
IPR015155 PLAA family ubiquitin binding domain
Mapman id Description
19.2.4.2.3.2 Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).substrate processing.ubiquitin-binding adaptor (UFD3)