Gene: Sopen01g049730

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g049730
  • Transcript Identifier Sopen01g049730.3
  • Gene Type Coding gene
  • Location Spenn-ch01 : 105673780-105687659 : positive

Gene Family Information

  • ID HOM05D004852
  • #Genes/#Species 152/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g049730.3

Descriptions

  • Description Homologous to Y-family DNA polymerases, contains BRCT domain. Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS). | REV1 | FUNCTIONS IN: DNA-directed DNA polymerase activity | INVOLVED IN: DNA repair, response to UV-B, response to DNA damage stimulus | LOCATED IN: intracellular, chloroplast | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: DNA polymerase, Y-family, little finger domain , DNA-repair protein, UmuC-like , DNA-repair protein, UmuC-like, N-terminal , DNA repair protein, Rev1 , BRCT | BEST Arabidopsis thaliana protein match is: DNA/RNA polymerases superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
InterProDNA repair
GO:0042276
IEA
InterProerror-prone translesion synthesis
GO:0006974
ISO
PLAZA Integrative Orthologycellular response to DNA damage stimulus AT5G44750
GO:0010224
ISO
PLAZA Integrative Orthologyresponse to UV-B AT5G44750

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003684
IEA
InterProdamaged DNA binding
GO:0016779
IEA
InterPronucleotidyltransferase activity
GO:0003887
ISO
PLAZA Integrative OrthologyDNA-directed DNA polymerase activity AT5G44750

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036775 DNA polymerase, Y-family, little finger domain superfamily
IPR043128 Reverse transcriptase/Diguanylate cyclase domain
IPR012112 DNA repair protein Rev1
IPR043502 DNA/RNA polymerase superfamily
IPR001357 BRCT domain
IPR001126 UmuC domain
IPR036420 BRCT domain superfamily
IPR017961 DNA polymerase, Y-family, little finger domain
Mapman id Description
14.2.5 DNA damage response.DNA repair polymerase activities.DNA polymerase (REV1)