Gene: Sopen01g045430

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g045430
  • Transcript Identifier Sopen01g045430.2
  • Gene Type Coding gene
  • Location Spenn-ch01 : 102205504-102209132 : positive

Gene Family Information

  • ID HOM05D005817
  • #Genes/#Species 134/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g045430.2

Descriptions

  • Description nucleic acid binding, RNA binding | FUNCTIONS IN: RNA binding, nucleic acid binding | INVOLVED IN: mRNA processing | LOCATED IN: nucleus, cytoplasm | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Tudor subgroup , Tudor domain , Survival motor neuron
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
InterPromRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0005737
IEA
InterProcytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002999 Tudor domain
IPR010304 Survival motor neuron
Mapman id Description
16.2.1.2.6 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).pre-mRNA splicing factor (SPF30)