Gene: Sopen01g045420

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g045420
  • Transcript Identifier Sopen01g045420.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 102186433-102200955 : positive

Gene Family Information

  • ID HOM05D003404
  • #Genes/#Species 201/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g045420.1

Descriptions

  • Description Arabidopsis thaliana homolog of human CAND1 (cullin-associated and neddylation-dissociated). Putative similarity to TBP-interacting protein TIP120. Ubiquitously expressed in plant tissues throughout development. T-DNA insertion mutant plants were completely sterile and resistant to sirtinol and auxin, but not to gibberellins or brassinolide. Displayed developmental phenotypes similar to those of axr1, namely, short petioles, downwardly curling leaves, shorter inflorescence. Required for SCF function and appears to modulate SCF complex cycling. Physically interacts with CUL1. | cullin-associated and neddylation dissociated (CAND1) | FUNCTIONS IN: binding | INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, vegetative to reproductive phase transition of meristem | LOCATED IN: cell wall, plasma membrane | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Armadillo-like helical , Armadillo-type fold , TATA-binding protein interacting (TIP20)
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010265
IEA
InterProSCF complex assembly
GO:0010051
ISO
PLAZA Integrative Orthologyxylem and phloem pattern formation AT2G02560
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT2G02560
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT2G02560

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G02560

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT2G02560
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G02560
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT2G02560

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016024 Armadillo-type fold
IPR013932 TATA-binding protein interacting (TIP20)
IPR039852 Cullin-associated NEDD8-dissociated protein 1/2
IPR011989 Armadillo-like helical
Mapman id Description
19.2.2.8.1.5 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.adaptor protein exchange factor (CAND1)