Gene: Sopen01g043760

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g043760
  • Transcript Identifier Sopen01g043760.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 100783502-100784697 : positive

Gene Family Information

  • ID HOM05D005591
  • #Genes/#Species 138/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g043760.1

Descriptions

  • Description Encodes a permease-like protein involved in lipid transfer from the ER to the chloroplast, more specifically, transfer of phosphatidate across the chloroplast inner membrane. Mutant leaves accumulate trigalactosyldiacylglycerol, triacylglycerol and phosphatidate. Chloroplast lipids are altered in their fatty acid composition and as a consequence the development of chloroplasts in the mutants are impacted. The mutant seeds has a higher abortion rate. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2. | trigalactosyldiacylglycerol 1 (TGD1) | FUNCTIONS IN: lipid transporter activity | INVOLVED IN: lipid transport | LOCATED IN: chloroplast outer membrane, chloroplast, chloroplast inner membrane, chloroplast envelope | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF140
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006869
ISO
PLAZA Integrative Orthologylipid transport AT1G19800

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G19800
GO:0005319
ISO
PLAZA Integrative Orthologylipid transporter activity AT1G19800

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043190
IEA
InterProATP-binding cassette (ABC) transporter complex
GO:0009707
ISO
PLAZA Integrative Orthologychloroplast outer membrane AT1G19800
GO:0009706
ISO
PLAZA Integrative Orthologychloroplast inner membrane AT1G19800
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G19800
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT1G19800

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR030802 ABC transporter permease MalE
IPR003453 ABC transport permease subunit MlaE, Proteobacteria
Mapman id Description
5.8.2.2.1 Lipid metabolism.lipid trafficking.endoplasmic reticulum-plastid lipid transfer.TGD lipid importer complex.permease component TGD1