Gene: Sopen01g043670

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g043670
  • Transcript Identifier Sopen01g043670.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 100715797-100718359 : negative

Gene Family Information

  • ID HOM05D006444
  • #Genes/#Species 124/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g043670.1

Descriptions

  • Description Polynucleotidyl transferase, ribonuclease H-like superfamily protein | FUNCTIONS IN: exonuclease activity, nucleic acid binding | LOCATED IN: intracellular, chloroplast | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Exonuclease , Polynucleotidyl transferase, ribonuclease H fold , Exonuclease, RNase T/DNA polymerase III
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000738
ISO
PLAZA Integrative OrthologyDNA catabolic process, exonucleolytic AT5G26940

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008408
IEA
InterPro3'-5' exonuclease activity
GO:0003676
IEA
InterPronucleic acid binding
GO:0004527
ISO
PLAZA Integrative Orthologyexonuclease activity AT5G26940

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G26940
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT5G26940

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR040393 Three-prime repair exonuclease 1/2
IPR012337 Ribonuclease H-like superfamily
IPR013520 Exonuclease, RNase T/DNA polymerase III
IPR036397 Ribonuclease H superfamily
Mapman id Description
35.1 not assigned.annotated