Gene: Sopen01g030640

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g030640
  • Transcript Identifier Sopen01g030640.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 87911039-87919083 : positive

Gene Family Information

  • ID HOM05D001090
  • #Genes/#Species 563/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g030640.1

Descriptions

  • Description Preprotein translocase secA subunit, chloroplast precursor - Spinacia oleracea (Spinach), Encodes the ATPase subunit of the chloroplast Sec translocation machinery which plays an essential role in chloroplast biogenesis and the regulation of photosynthesis, the absence of which triggers a retrograde signal, eventually leading to a reprogramming of chloroplast and mitochondrial gene expression. | Albino or Glassy Yellow 1 (AGY1) | FUNCTIONS IN: ATPase activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity, ATP binding | INVOLVED IN: in 6 processes | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: SecA, preprotein translocase , SecA motor DEAD , SecA Wing/Scaffold , SecA preprotein, cross-linking domain , SecA DEAD-like , SecA conserved site , SecA protein | BEST Arabidopsis thaliana protein match is: Preprotein translocase SecA family protein ., SecA Wing/Scaffold
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006605
IEA
InterProprotein targeting
GO:0006886
IEA
InterProintracellular protein transport
GO:0017038
IEA
InterProprotein import
GO:0010109
ISO
PLAZA Integrative Orthologyregulation of photosynthesis AT4G01800
GO:0010090
ISO
PLAZA Integrative Orthologytrichome morphogenesis AT4G01800
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT4G01800
GO:0009646
ISO
PLAZA Integrative Orthologyresponse to absence of light AT4G01800

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
InterPromembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044722 SecA, C-terminal helicase domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR036266 SecA, Wing/Scaffold superfamily
IPR000185 Protein translocase subunit SecA
IPR011116 SecA Wing/Scaffold
IPR036670 SecA, preprotein cross-linking domain superfamily
IPR011115 SecA DEAD-like, N-terminal
Mapman id Description
23.1.5.1 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.component SecA1