Gene: Sopen01g030300

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g030300
  • Transcript Identifier Sopen01g030300.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 87527535-87533173 : negative

Gene Family Information

  • ID HOM05D000070
  • #Genes/#Species 3945/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g030300.1

Descriptions

  • Description AAA-type ATPase - Over 90% homologous to CDC48a | cell division cycle 48C (CDC48C) | FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding | INVOLVED IN: embryo development ending in seed dormancy | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core , ATPase, AAA type, core , ATPase, AAA-type, conserved site | BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003959 ATPase, AAA-type, core
IPR031996 NVL2, nucleolin binding domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003593 AAA+ ATPase domain
IPR041569 AAA ATPase, AAA+ lid domain
Mapman id Description
19.2.4.1.1 Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.CDC48-NPL4-UFD1 chaperone complex.platform ATPase component CDC48