Gene: Sopen01g006840

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g006840
  • Transcript Identifier Sopen01g006840.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 7067905-7071735 : positive

Gene Family Information

  • ID HOM05D000234
  • #Genes/#Species 1784/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g006840.1

Descriptions

  • Description Encodes ARGONAUTE7, a member of the ARGONAUTE family, characterised by the presence of PAZ and PIWI domains. Involved in the regulation of developmental timing. Required for the accumulation of TAS3 ta-siRNAs but not for accumulation of miR171, miR173, miR390 or mi391. Localized in mature rosette leaves and floral buds. | ARGONAUTE7 (AGO7) | FUNCTIONS IN: nucleic acid binding | INVOLVED IN: production of ta-siRNAs involved in RNA interference, vegetative phase change, production of lsiRNA involved in RNA interference, regulation of development, heterochronic, gene silencing by miRNA | LOCATED IN: cellular_component unknown | EXPRESSED IN: 18 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 , Stem cell self-renewal protein Piwi , Argonaute/Dicer protein, PAZ , Polynucleotidyl transferase, ribonuclease H fold | BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009616
ISO
PLAZA Integrative OrthologyRNAi-mediated antiviral immune response AT1G69440
GO:0040034
ISO
PLAZA Integrative Orthologyregulation of development, heterochronic AT1G69440
GO:0035195
ISO
PLAZA Integrative Orthologygene silencing by miRNA AT1G69440
GO:0035196
ISO
PLAZA Integrative Orthologyproduction of miRNAs involved in gene silencing by miRNA AT1G69440
GO:0010050
ISO
PLAZA Integrative Orthologyvegetative phase change AT1G69440
GO:0031047
ISO
PLAZA Integrative Orthologygene silencing by RNA Solyc01g010970.3
GO:0010599
ISO
PLAZA Integrative Orthologyproduction of lsiRNA involved in RNA interference AT1G69440
GO:0051607
ISO
PLAZA Integrative Orthologydefense response to virus AT1G69440
GO:0016246
ISO
PLAZA Integrative OrthologyRNA interference AT1G69440
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin Solyc01g010970.3
GO:0010267
ISO
PLAZA Integrative Orthologyproduction of ta-siRNAs involved in RNA interference AT1G69440

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003676
IEA
InterPronucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G69440

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036085 PAZ domain superfamily
IPR012337 Ribonuclease H-like superfamily
IPR003165 Piwi domain
IPR014811 Argonaute, linker 1 domain
IPR036397 Ribonuclease H superfamily
IPR003100 PAZ domain
IPR032474 Protein argonaute, N-terminal
Mapman id Description
35.1 not assigned.annotated