Gene: Solyc12g096650.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g096650.2
  • Transcript Identifier Solyc12g096650.2.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 64992636-64997511 : positive

Gene Family Information

  • ID HOM05D004285
  • #Genes/#Species 166/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g096650.2.1
  • uniprot A0A3Q7JDY1
  • gene_id Solyc12g096650

Descriptions

  • Description Vacuolar protein sorting-associated protein 20-like protein 2 (AHRD V3.3 *** A0A1U8F6J1_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007034
IEA
GOA Databasevacuolar transport
GO:0007034
IEA
InterProvacuolar transport
GO:0006900
IBA
GOA Databasevesicle budding from membrane
GO:0032511
IBA
GOA Databaselate endosome to vacuole transport via multivesicular body sorting pathway
GO:0070676
ISO
PLAZA Integrative Orthologyintralumenal vesicle formation AT5G09260

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G63880

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005768
IEA
GOA Databaseendosome
GO:0000815
IBA
GOA DatabaseESCRT III complex
GO:0005771
IBA
GOA Databasemultivesicular body
GO:0005770
ISO
PLAZA Integrative Orthologylate endosome AT5G09260
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G09260
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G09260

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005024 Snf7 family
Mapman id Description
22.4.1.3.1 Vesicle trafficking.endocytic trafficking.ESCRT-mediated sorting.ESCRT-III complex.component VPS20