Gene: Solyc12g096640.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g096640.3
  • Transcript Identifier Solyc12g096640.3.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 64986721-64990603 : negative

Gene Family Information

  • ID HOM05D001480
  • #Genes/#Species 429/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g096640.3.1
  • uniprot A0A3Q7JYM7
  • gene_id Solyc12g096640

Descriptions

  • Description la-related protein 6B-like (AHRD V3.3 *** A0A1U8F078_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G43970

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus
GO:1990904
IEA
GOA Databaseribonucleoprotein complex
GO:1990904
IEA
InterProribonucleoprotein complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR034878 Plant La-related protein, RNA recognition motif
IPR006630 La-type HTH domain
IPR036390 Winged helix DNA-binding domain superfamily
IPR002344 Lupus La protein
IPR035979 RNA-binding domain superfamily
Mapman id Description
35.1 not assigned.annotated