Gene: Solyc12g049300.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g049300.2
  • Transcript Identifier Solyc12g049300.2.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 60462939-60464718 : positive

Gene Family Information

  • ID HOM05D000008
  • #Genes/#Species 9932/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g049300.2.1
  • uniprot A0A3Q7JB77
  • gene_id Solyc12g049300

Descriptions

  • Description R2R3MYB transcription factor 54
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010053
ISO
PLAZA Integrative Orthologyroot epidermal cell differentiation AT5G40330
GO:0006970
ISO
PLAZA Integrative Orthologyresponse to osmotic stress AT5G35550
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G40330
GO:0010091
ISO
PLAZA Integrative Orthologytrichome branching AT5G40330
GO:0048629
ISO
PLAZA Integrative Orthologytrichome patterning AT5G40330
GO:0006633
ISO
PLAZA Integrative Orthologyfatty acid biosynthetic process AT5G35550
GO:0010023
ISO
PLAZA Integrative Orthologyproanthocyanidin biosynthetic process AT5G35550
GO:0010026
ISO
PLAZA Integrative Orthologytrichome differentiation AT5G40330

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G40330
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G40330

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001005 SANT/Myb domain
IPR009057 Homeobox-like domain superfamily
IPR017930 Myb domain
Mapman id Description
15.5.2.1 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)