Gene: AT5G40330

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G40330
  • Transcript Identifier AT5G40330.1
  • Gene Type Coding gene
  • Location Chr5 : 16127849-16129468 : positive

Gene Family Information

  • ID HOM05D000008
  • #Genes/#Species 9932/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G40330.1
  • symbol MYB23
  • Alias ATMYB23,MYB DOMAIN PROTEIN 23,ATMYBRTF
  • uniprot Q96276

Descriptions

  • Description myb domain protein 23
  • Computational description myb domain protein 23 (MYB23); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 0 (TAIR:AT3G27920.1); Has 9054 Blast hits to 8348 proteins in 517 species: Archae - 0; Bacteria - 0; Metazoa - 771; Fungi - 507; Plants - 5936; Viruses - 3; Other Eukaryotes - 1837 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
TAS
Gene Ontologyregulation of transcription, DNA-templated1
GO:0010026
IMP
Gene Ontologytrichome differentiation2
GO:0010091
IMP
Gene Ontologytrichome branching3
GO:0048629
IGI
Gene Ontologytrichome patterning3
GO:0010053
IMP
Gene Ontologyroot epidermal cell differentiation4
GO:0030154
IBA
Gene Ontologycell differentiation5

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity1
GO:0005515
IPI
Gene Ontologyprotein binding3
GO:0000976
IPI
IBA
Gene Ontologytranscription cis-regulatory region binding5 6
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM, IBA
Gene Ontologynucleus4 5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001005 SANT/Myb domain
IPR017930 Myb domain
IPR009057 Homeobox-like domain superfamily
Mapman id Description
15.5.2.1 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)