Gene: Solyc11g005120.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g005120.3
  • Transcript Identifier Solyc11g005120.3.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 121178-123175 : negative

Gene Family Information

  • ID HOM05D000042
  • #Genes/#Species 4894/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g005120.3.1
  • gene_id Solyc11g005120

Descriptions

  • Description MADS box transcription factor (AHRD V3.3 *** Q8L5F7_DAUCA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051302
ISO
PLAZA Integrative Orthologyregulation of cell division AT5G23260
GO:0048481
ISO
PLAZA Integrative Orthologyplant ovule development AT5G23260
GO:2000029
ISO
PLAZA Integrative Orthologyregulation of proanthocyanidin biosynthetic process AT5G23260
GO:0048316
ISO
PLAZA Integrative Orthologyseed development AT5G23260
GO:0043068
ISO
PLAZA Integrative Orthologypositive regulation of programmed cell death Os02g0170300
GO:0080155
ISO
PLAZA Integrative Orthologyregulation of double fertilization forming a zygote and endosperm AT5G23260
GO:0019252
ISO
PLAZA Integrative Orthologystarch biosynthetic process Os02g0170300
GO:0045595
ISO
PLAZA Integrative Orthologyregulation of cell differentiation AT5G23260
GO:0080060
ISO
PLAZA Integrative Orthologyintegument development AT5G23260
GO:0008360
ISO
PLAZA Integrative Orthologyregulation of cell shape AT5G23260
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0045944
IEA
InterPropositive regulation of transcription by RNA polymerase II

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G23260
GO:0003677
IEA
InterProDNA binding
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0000977
IEA
InterProRNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0046983
IEA
InterProprotein dimerization activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036879 Transcription factor, MADS-box superfamily
IPR033896 MADS MEF2-like
IPR002100 Transcription factor, MADS-box
IPR002487 Transcription factor, K-box
Mapman id Description
15.5.14 RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)