Gene: Solyc11g005110.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g005110.3
  • Transcript Identifier Solyc11g005110.3.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 106425-119055 : negative

Gene Family Information

  • ID HOM05D006616
  • #Genes/#Species 121/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g005110.3.1
  • uniprot A0A3Q7IPQ3
  • gene_id Solyc11g005110

Descriptions

  • Description Polyglutamine-binding protein 1 (AHRD V3.3 *** A0A1U8GEZ8_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0045087
IEA
GOA Databaseinnate immune response
GO:0008380
IEA
GOA DatabaseRNA splicing
GO:0002376
IEA
GOA Databaseimmune system process
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0043484
IBA
GOA Databaseregulation of RNA splicing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0043021
IBA
GOA Databaseribonucleoprotein complex binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016607
IEA
GOA Databasenuclear speck
GO:0005634
IEA
GOA Databasenucleus
GO:0016604
IBA
GOA Databasenuclear body
GO:0005737
IBA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036020 WW domain superfamily
IPR001202 WW domain
Mapman id Description
35.1 not assigned.annotated