Gene: Solyc10g012240.3

General Information

Structural Information

Species Solanum lycopersicum
Gene Identifier Solyc10g012240.3
Transcript Identifier Solyc10g012240.3.1
Gene Type Coding gene
Location SL4.0ch10 : 4514120-4517839 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001451
#Genes/#Species 435/99
Phylogenetic origin

ID ORTHO05D001338
#Genes/#Species 429/99
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

tid Solyc10g012240.3.1
uniprot K4CYK1
gene_id Solyc10g012240

Descriptions

Short descriptions
Ortholog descriptions

Description Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200QU68_9MAGN)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006511	IBA	GOA Database	ubiquitin-dependent protein catabolic process
GO:0000209	IBA	GOA Database	protein polyubiquitination
GO:0009408	ISO	PLAZA Integrative Orthology	response to heat	AT5G41340

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005524	IEA	GOA Database	ATP binding
GO:0000166	IEA	GOA Database	nucleotide binding
GO:0016740	IEA	GOA Database	transferase activity
GO:0061631	IBA	GOA Database	ubiquitin conjugating enzyme activity
GO:0004842	ISO	PLAZA Integrative Orthology	ubiquitin-protein transferase activity	AT1G63800

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	IBA	GOA Database	nucleus
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT1G63800

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR000608	Ubiquitin-conjugating enzyme E2
IPR016135	Ubiquitin-conjugating enzyme/RWD-like

Mapman id	Description
19.2.1.3.1.3	Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Pro/N-degron pathway.GID ubiquitination complex.ubiquitin-conjugating component GID3
19.2.2.1.3	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-conjugating E2 protein (UBC)