Gene: Solyc08g075090.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc08g075090.4
  • Transcript Identifier Solyc08g075090.4.1
  • Gene Type Coding gene
  • Location SL4.0ch08 : 57355426-57360196 : negative

Gene Family Information

  • ID HOM05D001080
  • #Genes/#Species 568/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc08g075090.4.1
  • uniprot A0A3Q7HQF1
  • gene_id Solyc08g075090

Descriptions

  • Description bHLH transcription factor144
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000463
IBA
IEA
GOA Databasematuration of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463
IEA
InterPromaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G44120
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003723
IBA
GOA DatabaseRNA binding
GO:0003735
IBA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IEA
InterProstructural constituent of ribosome

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042788
ISO
PLAZA Integrative Orthologypolysomal ribosome AT2G01250
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT2G01250
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT2G01250
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT2G01250
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G01250
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT2G01250
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT2G01250
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G01250
GO:0022625
IBA
IEA
GOA Databasecytosolic large ribosomal subunit
GO:0022625
IEA
InterProcytosolic large ribosomal subunit

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039699 Ribosomal protein L7/L30
IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily
IPR036638 Helix-loop-helix DNA-binding domain superfamily
IPR016082 Ribosomal protein L30, ferredoxin-like fold domain
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
IPR005998 Ribosomal protein L7, eukaryotic
IPR012988 Ribosomal protein L30, N-terminal
IPR035808 Ribosomal protein L7, eukaryotic/archaeal
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)
17.1.2.1.5 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL7