Gene: Solyc08g068120.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc08g068120.3
  • Transcript Identifier Solyc08g068120.3.1
  • Gene Type Coding gene
  • Location SL4.0ch08 : 55297413-55312913 : positive

Gene Family Information

  • ID HOM05D003889
  • #Genes/#Species 179/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc08g068120.3.1
  • uniprot A0A3Q7IL01
  • gene_id Solyc08g068120

Descriptions

  • Description Helicase and polymerase-containing protein TEBICHI (AHRD V3.3 *** A0A2G2W6E8_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006260
IEA
GOA DatabaseDNA replication
GO:0006260
IEA
InterProDNA replication
GO:0009933
ISO
PLAZA Integrative Orthologymeristem structural organization AT4G32700
GO:2000011
ISO
PLAZA Integrative Orthologyregulation of adaxial/abaxial pattern formation AT4G32700
GO:0010468
ISO
PLAZA Integrative Orthologyregulation of gene expression AT4G32700
GO:0006310
ISO
PLAZA Integrative OrthologyDNA recombination AT4G32700
GO:0009640
ISO
PLAZA Integrative Orthologyphotomorphogenesis AT4G32700
GO:1902749
ISO
PLAZA Integrative Orthologyregulation of cell cycle G2/M phase transition AT4G32700
GO:1990067
ISO
PLAZA Integrative Orthologyintrachromosomal DNA recombination AT4G32700
GO:0051301
ISO
PLAZA Integrative Orthologycell division AT4G32700
GO:0006302
IBA
GOA Databasedouble-strand break repair
GO:0006261
IEA
GOA DatabaseDNA-dependent DNA replication
GO:0006261
IEA
InterProDNA-dependent DNA replication
GO:0071897
IEA
GOA DatabaseDNA biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003887
IBA
IEA
GOA DatabaseDNA-directed DNA polymerase activity
GO:0003887
IEA
InterProDNA-directed DNA polymerase activity
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0000166
IEA
GOA Databasenucleotide binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR043502 DNA/RNA polymerase superfamily
IPR001650 Helicase, C-terminal
IPR002298 DNA polymerase A
IPR036397 Ribonuclease H superfamily
IPR001098 DNA-directed DNA polymerase, family A, palm domain
Mapman id Description
14.2.2 DNA damage response.DNA repair polymerase activities.DNA polymerase theta (TEB)