Gene: Solyc07g047860.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc07g047860.4
  • Transcript Identifier Solyc07g047860.4.1
  • Gene Type Coding gene
  • Location SL4.0ch07 : 58971575-58976505 : negative

Gene Family Information

  • ID HOM05D005691
  • #Genes/#Species 136/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc07g047860.4.1
  • uniprot A0A3Q7I7E4
  • gene_id Solyc07g047860

Descriptions

  • Description Nuclear pore complex protein (AHRD V3.3 *** A0A2G2Z2P8_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006606
IBA
GOA Databaseprotein import into nucleus
GO:0000972
IBA
GOA Databasetranscription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0016973
IBA
GOA Databasepoly(A)+ mRNA export from nucleus

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0017056
IBA
IEA
GOA Databasestructural constituent of nuclear pore
GO:0017056
IEA
InterProstructural constituent of nuclear pore
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G05120

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0031080
IBA
GOA Databasenuclear pore outer ring

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037624 Nuclear pore complex protein Nup133-like
IPR007187 Nucleoporin, Nup133/Nup155-like, C-terminal
Mapman id Description
23.5.1.1.1.3 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.scaffold nucleoporin (NUP133)