Gene: AT2G05120

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G05120
  • Transcript Identifier AT2G05120.1
  • Gene Type Coding gene
  • Location Chr2 : 1842069-1845707 : negative

Gene Family Information

  • ID HOM05D005691
  • #Genes/#Species 136/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G05120.1
  • uniprot F4IGA5

Descriptions

  • Description Nucleoporin, Nup133/Nup155-like protein
  • Computational description Nucleoporin, Nup133/Nup155-like; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoporin, Nup133/Nup155-like, N-terminal (InterPro:IPR014908), Nucleoporin, Nup133/Nup155-like, C-terminal (InterPro:IPR007187); Has 161 Blast hits to 161 proteins in 58 species: Archae - 0; Bacteria - 2; Metazoa - 99; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006606
IBA
Gene Ontologyprotein import into nucleus1
GO:0016973
IBA
Gene Ontologypoly(A)+ mRNA export from nucleus1
GO:0000972
IBA
Gene Ontologytranscription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery1
GO:0051028
IEA
GOA DatabasemRNA transport
GO:0015031
IEA
GOA Databaseprotein transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding2
GO:0005515
IEA
InterProprotein binding
GO:0017056
IEA
GOA Databasestructural constituent of nuclear pore
GO:0017056
IBA
Gene Ontologystructural constituent of nuclear pore1
GO:0017056
IEA
InterProstructural constituent of nuclear pore

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0031080
IBA
Gene Ontologynuclear pore outer ring1
GO:0005643
IEA
GOA Databasenuclear pore
GO:0005635
IEA
GOA Databasenuclear envelope

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037624 Nuclear pore complex protein Nup133-like
IPR014908 Nucleoporin, Nup133/Nup155-like, N-terminal
IPR007187 Nucleoporin, Nup133/Nup155-like, C-terminal
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
23.5.1.1.1.3 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.scaffold nucleoporin (NUP133)