Gene: Solyc06g053400.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc06g053400.3
- Transcript Identifier Solyc06g053400.3.1
- Gene Type Coding gene
- Location SL4.0ch06 : 33956154-33965692 : positive
Gene Family Information
- ID HOM05D001792
- #Genes/#Species 364/99
- Phylogenetic origin
- ID ORTHO05D001821
- #Genes/#Species 350/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc06g053400.3.1
- uniprot K4C627
- gene_id Solyc06g053400
Descriptions
- Description Isopropylmalate synthase (AHRD V3.3 *** K4C627_SOLLC)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019752 | IEA | GOA Database | carboxylic acid metabolic process | |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT5G23010 |
| GO:0009625 | ISO | PLAZA Integrative Orthology | response to insect | AT5G23010 |
| GO:0019761 | ISO | PLAZA Integrative Orthology | glucosinolate biosynthetic process | AT5G23020 |
| GO:0009098 | IBA IEA | GOA Database | leucine biosynthetic process | |
| GO:0009098 | IEA | InterPro | leucine biosynthetic process | |
| GO:0009082 | IEA | GOA Database | branched-chain amino acid biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010177 | ISO | PLAZA Integrative Orthology | 2-(2'-methylthio)ethylmalate synthase activity | AT5G23020 |
| GO:0003852 | IBA IEA | GOA Database | 2-isopropylmalate synthase activity | |
| GO:0003852 | IEA | InterPro | 2-isopropylmalate synthase activity | |
| GO:0003824 | IEA | GOA Database | catalytic activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0046912 | IEA | GOA Database | acyltransferase, acyl groups converted into alkyl on transfer | |
| GO:0016740 | IEA | GOA Database | transferase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT1G18500 |
| GO:0009507 | IBA | GOA Database | chloroplast |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036230 | 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily |
| IPR000891 | Pyruvate carboxyltransferase |
| IPR013709 | 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain |
| IPR013785 | Aldolase-type TIM barrel |
| IPR005671 | 2-isopropylmalate synthase, bacterial-type |
| Mapman id | Description |
|---|---|
| 4.1.3.2.5.1 | Amino acid metabolism.biosynthesis.pyruvate family.pyruvate-derived amino acids.leucine.2-isopropylmalate synthase |